Kanokon's story revolves around Oyamada Kouta, a young first-year high school student who moves from the country to the city and thus transfers to Kunpō High School. On his first day at his new school, a second-year female student named Minamoto Chizuru asks him to meet her alone in the music room. When he arrives, she tries to seduce him - and reveals along the way that she's a fox deity.
When Kouta decides to keep it a secret, she decides that he is her destined partner. From that day on, she never leaves him alone, nor will she skip a chance to practice anything ecchi with him - whether he likes it or not.
But then a first year female student by the name of Nozomu arrives at Kouta's school, who, incidentally, also falls in love with Kouta. Kouta becomes much more involved in the world of deities, especially after Nozomu reveals that she is also a deity ...
